Software

CoRe-PA

Software for reconstructing cophylogenies

CREx

Common Interval Rearrangement Explorer

TreeREx

Assigning rearrangements to the edges of a given phylogenetic tree.

Tarzan

Software for reconstructing cophylogenies

HelixPSO

Particle Swarm Optimizer for RNA secondary structure prediction

mtviz

draw publication ready pictures of mitochondrial genomes

MITOS

Automatic Annotation of Metazoan Mitochondrial Genomes